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Update module Sparsesignatures#10345

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valerianilucrezia merged 24 commits intonf-core:masterfrom
valerianilucrezia:sparsesignature
Mar 15, 2026
Merged

Update module Sparsesignatures#10345
valerianilucrezia merged 24 commits intonf-core:masterfrom
valerianilucrezia:sparsesignature

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@valerianilucrezia
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Update emission of version.yml in R script and add topic of version.yml in main.nf

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda

@valerianilucrezia valerianilucrezia linked an issue Mar 6, 2026 that may be closed by this pull request
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@valerianilucrezia
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hi, @mashehu is the module okay like this? thank you in advance!

@valerianilucrezia
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hi @SPPearce, I updated the modules accordingly to your suggestion but now the singularity action is failing for this reason Failed to pull singularity image, how can I solve it? thank you in advance for your help

auto-merge was automatically disabled March 13, 2026 12:53

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@SPPearce
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Maybe a transient error that'll fix itself

@valerianilucrezia valerianilucrezia added this pull request to the merge queue Mar 15, 2026
Merged via the queue into nf-core:master with commit 1f92295 Mar 15, 2026
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@valerianilucrezia valerianilucrezia deleted the sparsesignature branch March 15, 2026 10:01
EfraMP pushed a commit to EfraMP/modules that referenced this pull request Mar 16, 2026
* minor to output version.yml

* minor to main script

* minor

* update snapshot

* solve error in versionsioning

* recreate snap

* solve issue with linting

* update snapshot

* update again snapshot

* update

* update

* update environment

* update snap

---------

Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Simon Pearce <24893913+SPPearce@users.noreply.github.com>
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update module: sparsesignatures

3 participants